meme2images

Usage:

meme2images [options] <motif file> <output folder>

Description

Generates EPS or PNG logo images from a <motif file> MEME Motif Format.

Input

Reads a <motif file> in MEME Motif Format.

Output

Writes logo images to the specified <output folder>.

Options

Option Parameter Description Default Behaviour
General Options
-motifID Output the logo for the motif with the given ID. This option can be repeated to selectively output multiple motif logos. Logos for all motifs are output.
-eps Output logos in EPS format. If neither -eps or -png is specified then output images in both EPS and PNG format.
-png Output logos in PNG format. If neither -eps or -png is specified then output images in both EPS and PNG format.
-rc Output reverse complemented logos in addition to the normal logos. Only output normal logos.
-help Display a help message and exit. Run as normal.